Filters
This instance of LAPIS supports the following sequence filters:
| Name | Type | Description |
|---|---|---|
| primaryKey | string (primary key) | Filters the "primaryKey" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| primaryKey.regex | string | Filters the "primaryKey" column using a regular expression, see string search |
| usherTree | string | Filters the "usherTree" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| usherTree.regex | string | Filters the "usherTree" column using a regular expression, see string search |
| date | date | Filters the "date" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| dateFrom | date | Filters the "date" column (including the boundary) |
| dateTo | date | Filters the "date" column (including the boundary) |
| region | string | Filters the "region" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| region.regex | string | Filters the "region" column using a regular expression, see string search |
| country | string | Filters the "country" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| country.regex | string | Filters the "country" column using a regular expression, see string search |
| pangoLineage | string | Filters the "pangoLineage" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| pangoLineage.regex | string | Filters the "pangoLineage" column using a regular expression, see string search |
| division | string | Filters the "division" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| division.regex | string | Filters the "division" column using a regular expression, see string search |
| age | int | Filters the "age" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| ageFrom | int | Filters the "age" column (including the boundary) |
| ageTo | int | Filters the "age" column (including the boundary) |
| qc_value | float | Filters the "qc_value" column with exact match. You can also supply an array of values - they will be combined with logical OR. |
| qc_valueFrom | float | Filters the "qc_value" column (including the boundary) |
| qc_valueTo | float | Filters the "qc_value" column (including the boundary) |
| test_boolean_column | boolean | Filters the "test_boolean_column" column for a boolean value |
| nucleotideMutations | list of strings | Filters for nucleotide mutations, see mutation filters |
| aminoAcidMutations | list of strings | Filters for amino acid mutations, see mutation filters |
| nucleotideInsertions | list of strings | In the format ins_false{'<position>:<insertion>'}. Example: ins_100:AGG |
| aminoAcidInsertions | list of strings | In the format ins_<sequenceName>:<position><insertion>. Example: ins_E:100:DEF |